Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type h+-transporting atpase subunit b | EDC27_0011 | Not Available | Negative | 11359 - 11784 | 16214.9 |
| cell elongation-specific peptidoglycan biosynthesis regulator roda | EDC27_0012 | Not Available | Negative | 12023 - 13138 | 41639.3 |
| peptidoglycan glycosyltransferase | EDC27_0013 | Not Available | Negative | 13143 - 15113 | 72904.8 |
| rod shape-determining protein mred | EDC27_0014 | Not Available | Negative | 15129 - 15569 | 16328.5 |
| rod shape-determining protein mrec | EDC27_0015 | Not Available | Negative | 15651 - 16508 | 32384.7 |
| rod shape-determining protein mreb | EDC27_0016 | Not Available | Negative | 16599 - 17630 | 36741.1 |
| radical sam superfamily enzyme ygiq (upf0313 family) | EDC27_0017 | Not Available | Positive | 17731 - 19635 | 70470.4 |
| thiazole-adenylate synthase | EDC27_0018 | Not Available | Negative | 19809 - 20606 | 28162.2 |
| hydroxymethylpyrimidine synthase | EDC27_0019 | Not Available | Negative | 20633 - 21910 | 45915.5 |
| hypothetical protein | EDC27_0020 | Not Available | Negative | 22151 - 22843 | 25352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
