Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | EDC27_2062 | Not Available | Positive | 2246562 - 2248211 | 59474.4 |
| thioredoxin 1 | EDC27_2063 | Not Available | Positive | 2248208 - 2248585 | 14060.4 |
| cytochrome c-type biogenesis protein | EDC27_2064 | Not Available | Positive | 2248610 - 2249314 | 24772.6 |
| tolc family type i secretion outer membrane protein | EDC27_2065 | Not Available | Positive | 2249352 - 2250737 | 51049.2 |
| rnd family efflux transporter mfp subunit | EDC27_2066 | Not Available | Positive | 2251285 - 2252496 | 44796.1 |
| multidrug efflux pump subunit acrb | EDC27_2067 | Not Available | Positive | 2252493 - 2255612 | 113868.0 |
| hypothetical protein | EDC27_2068 | Not Available | Positive | 2255629 - 2255787 | 5917.27 |
| glycerol-3-phosphate dehydrogenase subunit c | EDC27_2069 | Not Available | Positive | 2255887 - 2257305 | 52061.0 |
| hypothetical protein | EDC27_2072 | Not Available | Negative | 2258689 - 2259507 | 30315.8 |
| uncharacterized protein duf3108 | EDC27_2073 | Not Available | Positive | 2259511 - 2260260 | 27412.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
