Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | EDC27_2041 | Not Available | Positive | 2227114 - 2228115 | 36905.3 |
| phosphatidylserine decarboxylase | EDC27_2042 | Not Available | Positive | 2228582 - 2229259 | 25154.7 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EDC27_2043 | Not Available | Positive | 2229244 - 2230080 | 30410.6 |
| 3-isopropylmalate dehydratase large subunit | EDC27_2044 | Not Available | Positive | 2230105 - 2231367 | 45300.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | EDC27_2045 | Not Available | Positive | 2231466 - 2231999 | 19290.2 |
| aspartate semialdehyde dehydrogenase | EDC27_2046 | Not Available | Positive | 2232084 - 2233112 | 37044.1 |
| 16s rrna (guanine966-n2)-methyltransferase | EDC27_2047 | Not Available | Positive | 2233193 - 2233765 | 21062.7 |
| hypothetical protein | EDC27_2048 | Not Available | Positive | 2233982 - 2234551 | 21285.5 |
| phosphopantetheine adenylyltransferase | EDC27_2050 | Not Available | Positive | 2235005 - 2235523 | 19436.0 |
| membrane-bound lytic murein transglycosylase b | EDC27_2051 | Not Available | Negative | 2235939 - 2236895 | 35417.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
