Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | EDC27_2020 | Not Available | Negative | 2207376 - 2208377 | 36650.0 |
| hypothetical protein | EDC27_2021 | Not Available | Negative | 2208346 - 2209134 | 29194.3 |
| 3-dehydroquinate dehydratase | EDC27_2022 | Not Available | Negative | 2209325 - 2209780 | 16431.8 |
| shikimate kinase | EDC27_2023 | Not Available | Positive | 2210117 - 2210671 | 21037.1 |
| heat repeat protein | EDC27_2024 | Not Available | Positive | 2210743 - 2212068 | 50592.7 |
| pas domain s-box-containing protein | EDC27_2025 | Not Available | Negative | 2212100 - 2213632 | 55761.6 |
| nickel transport protein | EDC27_2026 | Not Available | Positive | 2214117 - 2214470 | 12596.3 |
| hypothetical protein | EDC27_2028 | Not Available | Positive | 2214884 - 2214994 | 4030.83 |
| cobalt/nickel transport system permease protein | EDC27_2029 | Not Available | Positive | 2215299 - 2215916 | 21055.5 |
| cobalt/nickel transport system permease protein | EDC27_2030 | Not Available | Positive | 2215886 - 2216842 | 35652.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
