Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | EDC27_1989 | Not Available | Negative | 2162782 - 2165757 | 109825.0 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | EDC27_1990 | Not Available | Negative | 2165754 - 2166884 | 40985.4 |
| hypothetical protein | EDC27_1991 | Not Available | Negative | 2166881 - 2167159 | 9736.63 |
| hemerythrin-like metal-binding protein | EDC27_1992 | Not Available | Negative | 2167186 - 2170563 | 123161.0 |
| hypothetical protein | EDC27_1993 | Not Available | Positive | 2170846 - 2171667 | 30277.1 |
| hypothetical protein | EDC27_1994 | Not Available | Positive | 2171654 - 2171761 | 4120.86 |
| amino acid abc transporter substrate-binding protein (paat family) | EDC27_1995 | Not Available | Positive | 2171855 - 2172610 | 28161.2 |
| aminotransferase | EDC27_1997 | Not Available | Positive | 2174386 - 2175606 | 44600.1 |
| rna recognition motif-containing protein | EDC27_1998 | Not Available | Negative | 2175671 - 2175946 | 9961.83 |
| l-ascorbate metabolism protein ulag (beta-lactamase superfamily) | EDC27_1999 | Not Available | Negative | 2176383 - 2177066 | 24452.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
