Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase | EDC27_1958 | Not Available | Negative | 2129652 - 2130818 | 42645.3 |
| dihydrodipicolinate reductase | EDC27_1959 | Not Available | Negative | 2130835 - 2131641 | 28259.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EDC27_1960 | Not Available | Negative | 2131658 - 2132533 | 31884.7 |
| diaminopimelate epimerase | EDC27_1961 | Not Available | Negative | 2132567 - 2133427 | 31377.6 |
| diaminopimelate decarboxylase | EDC27_1962 | Not Available | Negative | 2133437 - 2134687 | 46191.8 |
| hypothetical protein | EDC27_1963 | Not Available | Negative | 2134724 - 2135812 | 41298.5 |
| argininosuccinate lyase | EDC27_1964 | Not Available | Negative | 2135871 - 2137289 | 53472.8 |
| argininosuccinate synthase | EDC27_1965 | Not Available | Negative | 2137294 - 2138502 | 45045.0 |
| ornithine carbamoyltransferase | EDC27_1966 | Not Available | Negative | 2138625 - 2139539 | 34391.4 |
| acetylornithine aminotransferase | EDC27_1967 | Not Available | Negative | 2139536 - 2140732 | 43645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
