Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | EDC27_1917 | Not Available | Positive | 2090749 - 2091819 | 38908.6 |
| ammonium transporter | EDC27_1918 | Not Available | Negative | 2091938 - 2093323 | 48403.0 |
| nitrogen regulatory protein p-ii family | EDC27_1919 | Not Available | Negative | 2093365 - 2093703 | 12167.1 |
| Trna-leu | Not Available | Not Available | Positive | 2094169 - 2094256 | Not Available |
| ssra-binding protein | EDC27_1921 | Not Available | Negative | 2094472 - 2094960 | 18747.8 |
| phosphoenolpyruvate--protein phosphotransferase | EDC27_1922 | Not Available | Negative | 2094984 - 2096783 | 66790.9 |
| phosphocarrier protein | EDC27_1923 | Not Available | Negative | 2096936 - 2097229 | 10815.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | EDC27_1924 | Not Available | Negative | 2097267 - 2098664 | 51800.2 |
| subfamily b atp-binding cassette protein msba | EDC27_1925 | Not Available | Negative | 2098615 - 2100336 | 63620.0 |
| lipid-a-disaccharide synthase | EDC27_1926 | Not Available | Negative | 2100357 - 2101487 | 42064.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
