Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rfae bifunctional protein nucleotidyltransferase chain/domain | EDC27_1801 | Not Available | Positive | 1951702 - 1952205 | 18351.5 |
| putative abc transport system atp-binding protein | EDC27_1802 | Not Available | Positive | 1952257 - 1952955 | 24893.1 |
| putative abc transport system permease protein | EDC27_1803 | Not Available | Positive | 1952940 - 1955552 | 95473.5 |
| hypothetical protein | EDC27_1804 | Not Available | Negative | 1955415 - 1955699 | 10829.0 |
| shikimate kinase | EDC27_1805 | Not Available | Negative | 1955662 - 1956246 | 20702.3 |
| hypothetical protein | EDC27_1806 | Not Available | Negative | 1956243 - 1956785 | 20903.4 |
| nucleotide-binding universal stress uspa family protein | EDC27_1807 | Not Available | Negative | 1956790 - 1957266 | 18018.1 |
| dna-3-methyladenine glycosylase iii | EDC27_1808 | Not Available | Negative | 1957263 - 1957982 | 26940.7 |
| pyruvate formate lyase activating enzyme | EDC27_1809 | Not Available | Negative | 1957946 - 1958962 | 37610.4 |
| methyltransferase family protein | EDC27_1810 | Not Available | Negative | 1958979 - 1959836 | 32428.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
