Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC27_1780 | Not Available | Negative | 1936733 - 1936921 | 6931.37 |
| hypothetical protein | EDC27_1782 | Not Available | Positive | 1938714 - 1939421 | 26145.9 |
| Tmrna,resume consensus sequence (at 85): agcaaacgcagacgacta | Not Available | Not Available | Positive | 1939557 - 1939913 | Not Available |
| uncharacterized protein duf3786 | EDC27_1784 | Not Available | Positive | 1940115 - 1940738 | 22661.1 |
| uncharacterized protein ycbk (duf882 family) | EDC27_1785 | Not Available | Positive | 1940897 - 1941469 | 21520.2 |
| murein l,d-transpeptidase ycbb/ykud | EDC27_1786 | Not Available | Negative | 1941432 - 1943180 | 66457.1 |
| putative f0f1-atpase subunit (ca2+/mg2+ transporter) | EDC27_1787 | Not Available | Positive | 1943204 - 1943632 | 15965.0 |
| atp synthase i subunit | EDC27_1788 | Not Available | Positive | 1943629 - 1944045 | 15302.2 |
| atp synthase f0 subcomplex a subunit | EDC27_1789 | Not Available | Positive | 1944222 - 1944896 | 25567.3 |
| f0f1-type atp synthase membrane subunit c/vacuolar-type h+-atpase subunit k | EDC27_1790 | Not Available | Positive | 1944899 - 1945630 | 24469.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
