Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC27_1724 | Not Available | Positive | 1866118 - 1867800 | 63783.0 |
| crispr-associated cas1 family protein | EDC27_1725 | Not Available | Positive | 1867817 - 1868863 | 39602.3 |
| crispr-associated cas2 family protein | EDC27_1726 | Not Available | Positive | 1869025 - 1869309 | 11052.4 |
| hypothetical protein | EDC27_1727 | Not Available | Positive | 1881471 - 1881650 | 6783.26 |
| tetratricopeptide repeat protein | EDC27_1728 | Not Available | Positive | 1882281 - 1883450 | 43546.4 |
| hypothetical protein | EDC27_1729 | Not Available | Positive | 1884268 - 1884450 | 6546.07 |
| crispr-associated csx2 family protein | EDC27_1730 | Not Available | Negative | 1884822 - 1886573 | 65325.8 |
| hypothetical protein | EDC27_1731 | Not Available | Positive | 1887142 - 1888329 | 45736.1 |
| crispr-associated protein cmr1 | EDC27_1732 | Not Available | Positive | 1888793 - 1889935 | 43903.0 |
| crispr-associated cmr2 family protein | EDC27_1733 | Not Available | Positive | 1890004 - 1892976 | 111009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
