Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | EDC27_1691 | Not Available | Negative | 1827592 - 1829061 | 55557.6 |
| dcmp deaminase | EDC27_1692 | Not Available | Negative | 1829058 - 1829645 | 22070.2 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | EDC27_1693 | Not Available | Negative | 1829655 - 1830674 | 37893.5 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | EDC27_1694 | Not Available | Negative | 1830671 - 1831663 | 36601.7 |
| peptide/nickel transport system permease protein/dipeptide transport system permease protein | EDC27_1695 | Not Available | Negative | 1831680 - 1832606 | 32871.7 |
| peptide/nickel transport system permease protein | EDC27_1696 | Not Available | Negative | 1832608 - 1833612 | 37184.7 |
| peptide/nickel transport system substrate-binding protein | EDC27_1697 | Not Available | Negative | 1833956 - 1835566 | 60900.1 |
| membrane protease ftsh catalytic subunit | EDC27_1698 | Not Available | Positive | 1835827 - 1837722 | 70111.1 |
| hypothetical protein | EDC27_1699 | Not Available | Negative | 1837932 - 1838681 | 29023.3 |
| leucyl aminopeptidase | EDC27_1700 | Not Available | Negative | 1838984 - 1840504 | 55722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
