Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxaloacetate decarboxylase beta subunit | EDC27_1681 | Not Available | Positive | 1816947 - 1818065 | 39573.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | EDC27_1682 | Not Available | Positive | 1818400 - 1818615 | 7709.4 |
| glutaryl-coa dehydrogenase (non-decarboxylating) | EDC27_1683 | Not Available | Positive | 1818635 - 1819792 | 43058.5 |
| acetyl-coa carboxylase carboxyltransferase component | EDC27_1684 | Not Available | Positive | 1819809 - 1821365 | 57440.2 |
| hypothetical protein | EDC27_1685 | Not Available | Positive | 1821544 - 1822539 | 35889.6 |
| hypothetical protein | EDC27_1686 | Not Available | Positive | 1822556 - 1822966 | 15464.5 |
| trap transporter 4tm/12tm fusion protein | EDC27_1687 | Not Available | Positive | 1822954 - 1825041 | 75837.6 |
| antitoxin cptb | EDC27_1688 | Not Available | Negative | 1825687 - 1825980 | 11458.9 |
| hypothetical protein | EDC27_1689 | Not Available | Negative | 1825952 - 1826881 | 34739.3 |
| fmn phosphatase yigb (had superfamily) | EDC27_1690 | Not Available | Negative | 1826878 - 1827573 | 25864.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
