Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | EDC27_1529 | Not Available | Negative | 1645750 - 1646751 | 37040.2 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | EDC27_1530 | Not Available | Negative | 1646763 - 1647665 | 32697.0 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | EDC27_1531 | Not Available | Negative | 1647725 - 1648855 | 40496.0 |
| integration host factor subunit alpha | EDC27_1532 | Not Available | Negative | 1648881 - 1649168 | 10643.8 |
| Trna-met | Not Available | Not Available | Positive | 1649337 - 1649413 | Not Available |
| preq(0) biosynthesis protein qued | EDC27_1534 | Not Available | Positive | 1649626 - 1650000 | 14341.8 |
| uncharacterized protein duf2333 | EDC27_1535 | Not Available | Positive | 1650028 - 1651218 | 43608.2 |
| zn-dependent protease with chaperone function | EDC27_1536 | Not Available | Negative | 1651291 - 1653117 | 69754.1 |
| hypothetical protein | EDC27_1537 | Not Available | Negative | 1653117 - 1654025 | 34431.8 |
| arabinose-5-phosphate isomerase | EDC27_1538 | Not Available | Negative | 1654035 - 1655000 | 34661.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
