Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | EDC27_1467 | Not Available | Negative | 1574448 - 1575287 | 29720.3 |
| peptide/nickel transport system permease protein | EDC27_1468 | Not Available | Negative | 1575280 - 1576290 | 37435.4 |
| peptide/nickel transport system substrate-binding protein | EDC27_1469 | Not Available | Negative | 1576308 - 1577876 | 58319.3 |
| zinc carboxypeptidase | EDC27_1470 | Not Available | Negative | 1577890 - 1581282 | 128304.0 |
| pat family beta-lactamase induction signal transducer ampg | EDC27_1471 | Not Available | Negative | 1581360 - 1582613 | 44580.4 |
| l-lysine 2,3-aminomutase | EDC27_1472 | Not Available | Positive | 1582656 - 1583708 | 39557.5 |
| cysteinyl-trna synthetase | EDC27_1473 | Not Available | Negative | 1583782 - 1586112 | 86645.4 |
| ketopantoate reductase | EDC27_1474 | Not Available | Positive | 1587139 - 1588089 | 34629.1 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | EDC27_1475 | Not Available | Negative | 1588097 - 1589935 | 68444.3 |
| demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | EDC27_1476 | Not Available | Negative | 1589932 - 1590669 | 27620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
