Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 1562954 - 1563027 | Not Available |
| gtp pyrophosphokinase | EDC27_1458 | Not Available | Positive | 1563210 - 1565399 | 82755.1 |
| hypothetical protein | EDC27_1459 | Not Available | Negative | 1565401 - 1565721 | 12027.8 |
| serine protease do | EDC27_1460 | Not Available | Positive | 1565859 - 1567313 | 52346.0 |
| chalcone isomerase-like protein | EDC27_1461 | Not Available | Positive | 1567690 - 1568271 | 21176.0 |
| hnh endonuclease | EDC27_1462 | Not Available | Positive | 1568273 - 1568596 | 12548.2 |
| hypothetical protein | EDC27_1463 | Not Available | Positive | 1568613 - 1568798 | 6891.22 |
| exonuclease sbcc | EDC27_1464 | Not Available | Negative | 1568782 - 1572363 | 137186.0 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | EDC27_1465 | Not Available | Negative | 1572506 - 1573477 | 36355.2 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | EDC27_1466 | Not Available | Negative | 1573474 - 1574451 | 35537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
