Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC27_0147 | Not Available | Negative | 150017 - 150658 | 22891.8 |
| prolyl-trna synthetase | EDC27_0148 | Not Available | Negative | 150722 - 152479 | 65240.4 |
| putative zinc- or iron-chelating protein | EDC27_0149 | Not Available | Positive | 152821 - 153792 | 36620.7 |
| hypothetical protein | EDC27_0150 | Not Available | Negative | 154058 - 154429 | 13745.4 |
| 3-hydroxyisobutyrate dehydrogenase | EDC27_0151 | Not Available | Negative | 154496 - 155434 | 33271.6 |
| multimeric flavodoxin wrba | EDC27_0152 | Not Available | Negative | 155479 - 156354 | 32087.2 |
| hypothetical protein | EDC27_0153 | Not Available | Negative | 156744 - 157265 | 19352.3 |
| uncharacterized protein duf1998 | EDC27_0154 | Not Available | Negative | 157660 - 162903 | 196025.0 |
| n-6 dna methylase | EDC27_0155 | Not Available | Negative | 162900 - 167672 | 179994.0 |
| snf2 domain-containing protein | EDC27_0156 | Not Available | Negative | 167669 - 170686 | 112646.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
