Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | EDC27_1365 | Not Available | Positive | 1462107 - 1463597 | 53770.7 |
| radical sam family protein | EDC27_1366 | Not Available | Positive | 1463594 - 1464601 | 37417.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EDC27_1367 | Not Available | Positive | 1464738 - 1465823 | 38632.9 |
| gtp pyrophosphokinase | EDC27_1368 | Not Available | Positive | 1465837 - 1467984 | 82624.1 |
| formiminotetrahydrofolate cyclodeaminase | EDC27_1369 | Not Available | Positive | 1468080 - 1468694 | 22485.0 |
| 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase | EDC27_1370 | Not Available | Positive | 1468675 - 1469484 | 29529.0 |
| lsu ribosomal protein l28p | EDC27_1371 | Not Available | Negative | 1469501 - 1469695 | 7353.02 |
| tetratricopeptide repeat protein | EDC27_1372 | Not Available | Positive | 1469864 - 1471192 | 49959.5 |
| hypothetical protein | EDC27_1373 | Not Available | Negative | 1471092 - 1471631 | 20110.5 |
| transglutaminase-like putative cysteine protease | EDC27_1374 | Not Available | Negative | 1472101 - 1474023 | 71691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
