Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidoglycan lipid ii flippase | EDC27_1302 | Not Available | Negative | 1399094 - 1400671 | 58158.9 |
| 3-keto-5-aminohexanoate cleavage enzyme | EDC27_1303 | Not Available | Negative | 1400676 - 1401524 | 30732.3 |
| trap transporter 4tm/12tm fusion protein | EDC27_1304 | Not Available | Negative | 1401558 - 1403615 | 73451.9 |
| hypothetical protein | EDC27_1305 | Not Available | Negative | 1403725 - 1404714 | 35077.2 |
| amino acid abc transporter atp-binding protein (paat family) | EDC27_1307 | Not Available | Positive | 1405910 - 1406623 | 26032.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | EDC27_1309 | Not Available | Negative | 1407462 - 1408811 | 49389.4 |
| hypothetical protein | EDC27_1310 | Not Available | Positive | 1409004 - 1409135 | 5169.2 |
| lsu ribosomal protein l21p | EDC27_1311 | Not Available | Positive | 1409242 - 1409616 | 13594.5 |
| lsu ribosomal protein l27p | EDC27_1312 | Not Available | Positive | 1409620 - 1409889 | 9733.77 |
| gtp-binding protein | EDC27_1313 | Not Available | Positive | 1410281 - 1411357 | 39111.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
