Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nod factor-specific abc transporter nodj protein | EDC27_1206 | Not Available | Positive | 1302158 - 1302895 | 26998.7 |
| selenocysteine-specific elongation factor | EDC27_1207 | Not Available | Negative | 1303159 - 1305132 | 73099.0 |
| hypothetical protein | EDC27_1208 | Not Available | Negative | 1305150 - 1305704 | 21808.4 |
| f420-non-reducing hydrogenase subunit d | EDC27_1209 | Not Available | Negative | 1305815 - 1306279 | 16775.4 |
| amino acid abc transporter atp-binding protein (paat family) | EDC27_1210 | Not Available | Positive | 1306681 - 1307409 | 27208.5 |
| branched chain amino acid aminotransferase | EDC27_1211 | Not Available | Positive | 1307496 - 1308569 | 40094.2 |
| hypothetical protein | EDC27_1212 | Not Available | Positive | 1308831 - 1308998 | 6098.5 |
| d-3-phosphoglycerate dehydrogenase | EDC27_1213 | Not Available | Negative | 1309078 - 1310658 | 57634.3 |
| amino acid/amide abc transporter atp-binding protein 2 (haat family) | EDC27_1214 | Not Available | Negative | 1310676 - 1311395 | 26418.5 |
| amino acid/amide abc transporter atp-binding protein 1 (haat family) | EDC27_1215 | Not Available | Negative | 1311388 - 1312164 | 29192.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
