Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | EDC27_1164 | Not Available | Negative | 1258715 - 1260922 | 84780.8 |
| glutamyl-trna synthetase | EDC27_1165 | Not Available | Negative | 1261074 - 1262249 | 44629.0 |
| tripartite atp-independent transporter dctq subunit | EDC27_1166 | Not Available | Negative | 1262250 - 1262664 | 15429.3 |
| trap-type mannitol/chloroaromatic compound transport system substrate-binding protein | EDC27_1167 | Not Available | Negative | 1262752 - 1263909 | 43639.5 |
| glycolate oxidase | EDC27_1168 | Not Available | Positive | 1264477 - 1265862 | 49406.7 |
| glycolate oxidase iron-sulfur subunit | EDC27_1169 | Not Available | Positive | 1265864 - 1267165 | 47354.2 |
| gntr family transcriptional regulator | EDC27_1170 | Not Available | Positive | 1267162 - 1267878 | 27084.8 |
| holin-like protein | EDC27_1171 | Not Available | Positive | 1267817 - 1268221 | 14722.5 |
| putative murein hydrolase (tigr00659 family) | EDC27_1172 | Not Available | Positive | 1268221 - 1268925 | 24167.4 |
| crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferase | EDC27_1173 | Not Available | Positive | 1268974 - 1270308 | 50081.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
