Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseCOB47_RS04400Not AvailableNegative1003041 - 100379928462.7
abc transporter atp-binding proteinCOB47_RS04405Not AvailableNegative1003786 - 100472435305.3
pld nuclease n-terminal domain-containing proteinCOB47_RS04410Not AvailableNegative1004717 - 10049238010.5
hypothetical proteinCOB47_RS04415Not AvailableNegative1004949 - 100523611081.1
hypothetical proteinCOB47_RS04420Not AvailableNegative1005241 - 100564215626.7
rna polymerase sigma factor sigyCOB47_RS04425Not AvailableNegative1005623 - 100617421423.9
hypothetical proteinCOB47_RS04430Not AvailablePositive1006350 - 100719832679.7
shikimate kinaseCOB47_RS04435Not AvailablePositive1007328 - 100784619466.0
tim barrel proteinCOB47_RS04440Not AvailablePositive1007843 - 100870332983.4
type ii 3-dehydroquinate dehydrataseCOB47_RS04445Not AvailablePositive1008713 - 100915016155.5

Displaying genes 911 – 920 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.