Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system activity regulator yychCOB47_RS00345Not AvailablePositive78430 - 7972849947.3
two-component system regulatory protein yyciCOB47_RS00350Not AvailablePositive79753 - 8048128289.4
abc transporter permeaseCOB47_RS00355Not AvailablePositive80702 - 8165835848.7
carbohydrate abc transporter permeaseCOB47_RS00360Not AvailablePositive81706 - 8259033437.9
extracellular solute-binding proteinCOB47_RS00365Not AvailablePositive82684 - 8429761976.8
sensor histidine kinaseCOB47_RS00370Not AvailablePositive84465 - 8629170055.9
response regulator transcription factorCOB47_RS00375Not AvailablePositive86325 - 8787260743.7
carbohydrate binding domain-containing proteinCOB47_RS00380Not AvailablePositive88037 - 93235190710.0
hypothetical proteinCOB47_RS00385Not AvailablePositive93344 - 96577125783.0
hypothetical proteinCOB47_RS12390Not AvailablePositive96660 - 9708216569.4

Displaying genes 71 – 80 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.