Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,4-alpha-glucan branching protein glgbCOB47_RS02480Not AvailableNegative592930 - 59488276819.6
radc family proteinCOB47_RS02485Not AvailablePositive595191 - 59588325973.2
lysm peptidoglycan-binding domain-containing proteinCOB47_RS02490Not AvailableNegative595946 - 59703440500.9
isncy family transposaseCOB47_RS02495Not AvailablePositive597210 - 59815437103.3
stalk domain-containing proteinCOB47_RS02500Not AvailableNegative598174 - 59859616331.9
6,7-dimethyl-8-ribityllumazine synthaseCOB47_RS02505Not AvailableNegative598702 - 59916916854.4
3,4-dihydroxy-2-butanone-4-phosphate synthaseCOB47_RS02510Not AvailableNegative599156 - 60036445907.9
riboflavin synthaseCOB47_RS02515Not AvailableNegative600370 - 60094821247.3
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdCOB47_RS02520Not AvailableNegative600941 - 60205641395.7
helix-turn-helix domain-containing proteinCOB47_RS02530Not AvailablePositive602559 - 60369544553.2

Displaying genes 521 – 530 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.