Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yvrj family proteinCOB47_RS12050Not AvailableNegative2494283 - 24944325611.99
duf2922 domain-containing proteinCOB47_RS11570Not AvailableNegative2494545 - 24947577795.7
duf1659 domain-containing proteinCOB47_RS11575Not AvailableNegative2494816 - 24950287805.54
stage v sporulation protein acCOB47_RS11580Not AvailablePositive2495238 - 249569616201.0
stage v sporulation protein adCOB47_RS11585Not AvailablePositive2495716 - 249672636661.1
stage v sporulation protein aeCOB47_RS11590Not AvailablePositive2496775 - 249712812126.2
crispr-associated protein csx20COB47_RS11595Not AvailableNegative2497173 - 249757115677.0
type ii toxin-antitoxin system hica family toxinCOB47_RS11600Not AvailablePositive2498066 - 24982487007.79
type ii toxin-antitoxin system hicb family antitoxinCOB47_RS11605Not AvailablePositive2498382 - 249879815533.7
hypothetical proteinCOB47_RS11610Not AvailableNegative2498897 - 249974232443.5

Displaying genes 2371 – 2380 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.