Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii fructose-bisphosphate aldolaseCOB47_RS10805Not AvailableNegative2320955 - 232179131019.6
xylulokinaseCOB47_RS10810Not AvailableNegative2321811 - 232330455509.7
deor/glpr family dna-binding transcription regulatorCOB47_RS10815Not AvailableNegative2323356 - 232411727914.0
pectinesterase family proteinCOB47_RS12040Not AvailableNegative2324302 - 232463713403.0
zinc ribbon domain-containing proteinCOB47_RS10825Not AvailableNegative2324776 - 232605649705.7
atp-binding proteinCOB47_RS10830Not AvailableNegative2326282 - 232673417179.8
nucleoside deaminaseCOB47_RS10835Not AvailableNegative2326898 - 232732916261.0
hypothetical proteinCOB47_RS10840Not AvailablePositive2327472 - 232880051436.7
divergent polysaccharide deacetylase family proteinCOB47_RS10845Not AvailablePositive2328882 - 232973331751.5
hypothetical proteinCOB47_RS10850Not AvailablePositive2329834 - 233205686134.0

Displaying genes 2221 – 2230 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.