Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1015 domain-containing proteinCOB47_RS09540Not AvailableNegative2062425 - 206369949909.1
phosphoglycerate dehydrogenaseCOB47_RS09545Not AvailableNegative2063756 - 206535159046.9
pyridoxal-phosphate-dependent aminotransferase family proteinCOB47_RS09550Not AvailableNegative2065356 - 206651643131.3
cd1247 n-terminal domain-containing proteinCOB47_RS09555Not AvailableNegative2066739 - 206720918362.2
elongation factor pCOB47_RS09560Not AvailableNegative2067313 - 206787020942.2
rne/rng family ribonucleaseCOB47_RS09565Not AvailableNegative2067938 - 206965365637.6
tigr03936 family radical sam-associated proteinCOB47_RS09570Not AvailableNegative2069653 - 207028825396.1
tigr03960 family b12-binding radical sam proteinCOB47_RS09575Not AvailableNegative2070275 - 207211671477.7
degv family proteinCOB47_RS09580Not AvailableNegative2072201 - 207304330902.6
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlCOB47_RS09585Not AvailableNegative2073072 - 207353617954.7

Displaying genes 1961 – 1970 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.