Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinCOB47_RS00880Not AvailablePositive229206 - 23101167557.8
glycosyl hydrolaseCOB47_RS00885Not AvailablePositive231124 - 233835101967.0
peptidoglycan dd-metalloendopeptidase family proteinCOB47_RS00890Not AvailablePositive234081 - 23582966083.5
7-cyano-7-deazaguanine synthase quecCOB47_RS00895Not AvailableNegative235913 - 23657824772.0
rida family proteinCOB47_RS00900Not AvailableNegative236592 - 23696913653.5
zinc ribbon domain-containing proteinCOB47_RS00905Not AvailableNegative236997 - 23739815863.2
moad/this family proteinCOB47_RS00910Not AvailablePositive237540 - 2377346909.37
tigr00269 family proteinCOB47_RS00915Not AvailablePositive237763 - 23867434865.2
transposaseCOB47_RS12825Not AvailableNegative238738 - 2388935905.27
ppc domain-containing dna-binding proteinCOB47_RS00920Not AvailablePositive239030 - 23946716762.5

Displaying genes 181 – 190 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.