Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47, complete sequence.

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trmh family rna methyltransferaseCOB47_RS06800Not AvailableNegative1468054 - 146886630686.5
50s ribosomal protein l20COB47_RS06805Not AvailableNegative1468910 - 146926913849.3
50s ribosomal protein l35COB47_RS06810Not AvailableNegative1469304 - 14695017384.52
translation initiation factor if-3COB47_RS06815Not AvailableNegative1469529 - 147002919185.7
transposaseCOB47_RS12305Not AvailableNegative1470314 - 147169352938.3
purine or other phosphorylase family 1COB47_RS06825Not AvailablePositive1471962 - 147280131971.0
spl family radical sam proteinCOB47_RS06830Not AvailablePositive1472770 - 147378039958.9
ofa family mfs transporterCOB47_RS06835Not AvailableNegative1473815 - 147506245792.9
5-(carboxyamino)imidazole ribonucleotide mutaseCOB47_RS06840Not AvailableNegative1475062 - 147558918835.1
5-(carboxyamino)imidazole ribonucleotide synthaseCOB47_RS06845Not AvailableNegative1475595 - 147680645446.4

Displaying genes 1401 – 1410 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.