Thermococcus sibiricus MM 739

Gram-negativeCocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sibiricus (strain MM 739 / DSM 12597) is a hyperthermophilic anaerobic archaeon isolated from a well of the never flooded oil-bearing Jurassic horizon of a high-temperature oil reservoir. T. sibiricus indicate the ability to metabolize the buried organic matter from the original oceanic sediment. Its numerous hydrolytic enzymes (e.g., cellulolytic enzymes, agarase, laminarinase, and lipases) and metabolic pathways, support the proposal of the indigenous origin of T. sibiricus in the oil reservoir, and explain its survival over geologic time and its proliferation in this habitat. Indeed, in addition to proteinaceous compounds known previously to be present in oil reservoirs at limiting concentrations, its growth is stimulated by cellulose, agarose, and triacylglycerides, as well as by alkanes. Two polysaccharide degradation loci are probably acquired by T. sibiricus from thermophilic bacteria following lateral gene transfer events. The first, a "saccharolytic gene island" absent in the genomes of other members of the order Thermococcales, contains the complete set of genes responsible for the hydrolysis of cellulose and beta-linked polysaccharides. The second harbors genes for maltose and trehalose degradation. Moreover, T. sibiricus probably possesses a new mechanism of n-alkane degradation, since its growth is stimulated by hexadecane and no enzymes of currently known pathways are encoded. Not reported so far for hyperthermophilic archaea is the lipolytic growth of T. sibiricus on triacylglycerides. This growth is apparently enabled by the function of an extracellular true lipase(s) encoded by the genome. (Adaptated from PMID:19447963). (HAMAP: THESM)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sibiricus
StrainMM 739

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Thermococcus sibiricus MM 739
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHot spring
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceOrganotroph
PathogenicityNo

Genome Summary

Thermococcus sibiricus MM 739, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTSIB_RS01355Not AvailableNegative283130 - 28360918604.4
serine/threonine-protein kinase rio2TSIB_RS01360Q58473Negative283615 - 28453835837.8
mfs transporterTSIB_RS01365Q0K843Positive284618 - 28571540384.7
nadph-dependent hydrogenase/sulfhydrogenase 1 subunit betaTSIB_RS01370Q8U2E5Positive285979 - 28708243068.5
nadph-dependent hydrogenase/sulfhydrogenase 1 subunit gammaTSIB_RS01375Q8U2E4Positive287079 - 28797233475.9
nadph-dependent hydrogenase/sulfhydrogenase 1 subunit deltaTSIB_RS01380E7FHU4Positive287983 - 28876829352.7
ni/fe hydrogenase subunit alphaTSIB_RS01385E7FI44Positive288768 - 29005148660.0
hydrogenase maturation proteaseTSIB_RS01390Q51795Positive290103 - 29054916561.4
putative rna uridine n3 methyltransferaseTSIB_RS01395Q5T280Positive290673 - 29144929363.4
50s ribosomal protein l3TSIB_RS01400C6A159Positive291451 - 29253040674.2

Displaying genes 281 – 290 of 2050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.