Thermococcus sibiricus MM 739

Gram-negativeCocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sibiricus (strain MM 739 / DSM 12597) is a hyperthermophilic anaerobic archaeon isolated from a well of the never flooded oil-bearing Jurassic horizon of a high-temperature oil reservoir. T. sibiricus indicate the ability to metabolize the buried organic matter from the original oceanic sediment. Its numerous hydrolytic enzymes (e.g., cellulolytic enzymes, agarase, laminarinase, and lipases) and metabolic pathways, support the proposal of the indigenous origin of T. sibiricus in the oil reservoir, and explain its survival over geologic time and its proliferation in this habitat. Indeed, in addition to proteinaceous compounds known previously to be present in oil reservoirs at limiting concentrations, its growth is stimulated by cellulose, agarose, and triacylglycerides, as well as by alkanes. Two polysaccharide degradation loci are probably acquired by T. sibiricus from thermophilic bacteria following lateral gene transfer events. The first, a "saccharolytic gene island" absent in the genomes of other members of the order Thermococcales, contains the complete set of genes responsible for the hydrolysis of cellulose and beta-linked polysaccharides. The second harbors genes for maltose and trehalose degradation. Moreover, T. sibiricus probably possesses a new mechanism of n-alkane degradation, since its growth is stimulated by hexadecane and no enzymes of currently known pathways are encoded. Not reported so far for hyperthermophilic archaea is the lipolytic growth of T. sibiricus on triacylglycerides. This growth is apparently enabled by the function of an extracellular true lipase(s) encoded by the genome. (Adaptated from PMID:19447963). (HAMAP: THESM)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sibiricus
StrainMM 739

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Thermococcus sibiricus MM 739
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHot spring
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceOrganotroph
PathogenicityNo

Genome Summary

Thermococcus sibiricus MM 739, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rubrerythrin family proteinTSIB_RS09225Q97ET8Negative1702464 - 170297919476.4
nad(p)/fad-dependent oxidoreductaseTSIB_RS09230Q8U1K9Negative1703066 - 170415740091.6
ferritin family proteinTSIB_RS09235Not AvailableNegative1704169 - 170470820649.1
fpra family a-type flavoproteinTSIB_RS09240Q58142Negative1704811 - 170603746696.2
peroxiredoxinTSIB_RS09245P0C5D4Negative1706087 - 170653617357.1
thiamine pyrophosphate-dependent enzymeTSIB_RS09250Q9YA11Negative1706564 - 170743632584.3
2-oxoacid:acceptor oxidoreductase subunit alphaTSIB_RS09255P72578Negative1707433 - 170914563423.6
peroxiredoxinTSIB_RS09260Q5JF30Negative1709272 - 170992224624.7
n-glycosylase/dna lyaseTSIB_RS09265Q5JI79Negative1710061 - 171081629679.2
nadh-quinone oxidoreductase subunit nuoiTSIB_RS09270Not AvailableNegative1710865 - 171147323700.7

Displaying genes 1891 – 1900 of 2050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.