Thermococcus sibiricus MM 739

Gram-negativeCocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sibiricus (strain MM 739 / DSM 12597) is a hyperthermophilic anaerobic archaeon isolated from a well of the never flooded oil-bearing Jurassic horizon of a high-temperature oil reservoir. T. sibiricus indicate the ability to metabolize the buried organic matter from the original oceanic sediment. Its numerous hydrolytic enzymes (e.g., cellulolytic enzymes, agarase, laminarinase, and lipases) and metabolic pathways, support the proposal of the indigenous origin of T. sibiricus in the oil reservoir, and explain its survival over geologic time and its proliferation in this habitat. Indeed, in addition to proteinaceous compounds known previously to be present in oil reservoirs at limiting concentrations, its growth is stimulated by cellulose, agarose, and triacylglycerides, as well as by alkanes. Two polysaccharide degradation loci are probably acquired by T. sibiricus from thermophilic bacteria following lateral gene transfer events. The first, a "saccharolytic gene island" absent in the genomes of other members of the order Thermococcales, contains the complete set of genes responsible for the hydrolysis of cellulose and beta-linked polysaccharides. The second harbors genes for maltose and trehalose degradation. Moreover, T. sibiricus probably possesses a new mechanism of n-alkane degradation, since its growth is stimulated by hexadecane and no enzymes of currently known pathways are encoded. Not reported so far for hyperthermophilic archaea is the lipolytic growth of T. sibiricus on triacylglycerides. This growth is apparently enabled by the function of an extracellular true lipase(s) encoded by the genome. (Adaptated from PMID:19447963). (HAMAP: THESM)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sibiricus
StrainMM 739

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Thermococcus sibiricus MM 739
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHot spring
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceOrganotroph
PathogenicityNo

Genome Summary

Thermococcus sibiricus MM 739, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf192 domain-containing proteinTSIB_RS07110C6A4G9Negative1310576 - 131104017471.3
sulfide/dihydroorotate dehydrogenase-like fad/nad-binding proteinTSIB_RS07115Q8U194Positive1311241 - 131208931555.2
nadph-dependent glutamate synthaseTSIB_RS07120Q8U195Positive1312090 - 131353252555.8
2-oxoacid:ferredoxin oxidoreductase subunit gammaTSIB_RS07125Not AvailableNegative1313567 - 131412720218.6
2-oxoacid:ferredoxin oxidoreductase subunit betaTSIB_RS07130P80905Negative1314124 - 131496931077.7
2-oxoacid:acceptor oxidoreductase subunit alphaTSIB_RS07135P80904Negative1314975 - 131611441850.7
2-oxoacid:ferredoxin oxidoreductase subunit gammaTSIB_RS07140Q57956Negative1316128 - 131664018161.2
2-oxoacid:ferredoxin oxidoreductase subunit betaTSIB_RS07145Q57957Negative1316630 - 131749331177.6
2-oxoacid:acceptor oxidoreductase subunit alphaTSIB_RS07150Q57724Negative1317549 - 131876645247.5
2-oxoglutarate ferredoxin oxidoreductase subunit deltaTSIB_RS07155Not AvailableNegative1318773 - 13190309512.75

Displaying genes 1461 – 1470 of 2050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.