Peptostreptococcus stomatis DSM 17678

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptostreptococcaceae

Genus

Peptostreptococcus

Description

Peptostreptococcus stomatis DSM 17678 is a Gram-positive, coccoid-shaped bacterium that thrives in thermophilic conditions, classified as a chemotroph, and is an obligate anaerobe. This microbe is part of the normal flora of human and animal oral cavities, gastrointestinal tracts, and other mucosal surfaces, contributing to the complex ecosystem of microbial communities in these environments. As a Gram-positive organism, Peptostreptococcus stomatis possesses a thick peptidoglycan layer in its cell wall, which retains the crystal violet stain during Gram staining, imparting a characteristic purple hue. Its coccoid shape allows for efficient adaptation to various niches within the body. As part of the temperature preference category of thermophiles, this microbe can withstand and thrive in higher temperatures, making it well-suited for the warm environments found in the oral and gastrointestinal tracts. Being a chemotroph, Peptostreptococcus stomatis derives energy from the chemical compounds in its surroundings, particularly through the fermentation of carbohydrates and amino acids. This metabolic capability supports its survival in anaerobic conditions. As an obligate anaerobe, it cannot survive in environments with oxygen; therefore, it plays a crucial role in balancing the microbial ecology within anaerobic habitats. Peptostreptococcus stomatis is notable for its involvement in human health and disease, acting as a commensal organism that maintains oral and gut health while also having the potential to contribute to infections when the host's immune defenses are compromised. Its presence in various body sites underscores its adaptability and importance in both symbiotic and pathogenic roles within the microbial community. The ability of this microbe to ferment both carbohydrates and amino acids also offers potential applications in biotechnology, particularly in the development of probiotics and bioconversion processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptostreptococcaceae
GenusPeptostreptococcus
SpeciesPeptostreptococcus stomatis
StrainDSM 17678

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Peptostreptococcus stomatis DSM 17678
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptostreptococcus stomatis DSM 17678 contig00005, whole genome

Gene Summary

Adenine Count

628553 bp

Thymine Count

630613 bp

Guanine Count

367564 bp

Cytosine Count

361313 bp

Genome Length

1988044 bp

Protein-coding Genes

1578 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam domain proteinHMPREF0634_0811Not AvailablePositive25655 - 2751471537.3
radical sam-linked proteinHMPREF0634_0812Not AvailablePositive27508 - 2821226700.7
ribonuclease, rne/rng familyHMPREF0634_0813Not AvailablePositive28244 - 2964453300.3
ribonuclease zHMPREF0634_0814Not AvailableNegative29776 - 3069634145.4
putative protein crcbHMPREF0634_0815Not AvailableNegative30690 - 3115116913.3
putative protein crcbHMPREF0634_0816Not AvailableNegative31148 - 3149512396.5
regulatory protein recxHMPREF0634_0817Not AvailablePositive31660 - 3228324402.3
nicotinate-nucleotide adenylyltransferaseHMPREF0634_0818Not AvailablePositive32464 - 3315926895.4
hydrolase, hd familyHMPREF0634_0819Not AvailablePositive33160 - 3373521637.2
leucine--trna ligaseHMPREF0634_0820Not AvailablePositive34547 - 3696792181.4

Displaying genes 61 – 70 of 1659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

319 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da

Displaying 1–10 of 319 metabolites

Health Effects

No health effects information available for this bacterium.