Solidesulfovibrio fructosivorans JJ]

rod

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Solidesulfovibrio

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusSolidesulfovibrio
SpeciesSolidesulfovibrio fructosivorans
StrainJJ]

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solidesulfovibrio fructosivorans JJ] strain JJ ctg00073, whole

Gene Summary

Adenine Count

850115 bp

Thymine Count

839346 bp

Guanine Count

1489383 bp

Cytosine Count

1494749 bp

Genome Length

4673595 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease, beta subunitDesfrDRAFT_0886B1J814Negative998302 - 99862511607.0
urease, gamma subunitDesfrDRAFT_0887B7K906Negative998649 - 99895110995.5
urease accessory protein uredDesfrDRAFT_0888A1KBB8Negative998970 - 99982130027.7
urea abc transporter, atp-binding protein urteDesfrDRAFT_0889P0A192Negative999829 - 100052425471.7
urea abc transporter, atp-binding protein urtdDesfrDRAFT_0890Not AvailableNegative1000526 - 100131728600.8
urea abc transporter, permease protein urtcDesfrDRAFT_0891Not AvailableNegative1001314 - 100245041226.4
urea abc transporter, permease protein urtbDesfrDRAFT_0892P0A2J2Negative1002467 - 100408356701.0
urea abc transporter, urea binding proteinDesfrDRAFT_0893P27017Negative1004145 - 100544647960.9
gntr domain proteinDesfrDRAFT_0894P0ACL7Negative1005631 - 100633225040.2
peptidoglycan-binding domain 1 proteinDesfrDRAFT_0895Not AvailableNegative1007138 - 100887762112.7

Displaying genes 931 – 940 of 4211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

200 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 200 metabolites

Health Effects

No health effects information available for this bacterium.