Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | ESP50_04805 | Not Available | Negative | 1058561 - 1059631 | 39575.3 |
| transcription termination factor rho | ESP50_04810 | Not Available | Negative | 1059636 - 1061789 | 76882.4 |
| homoserine kinase | ESP50_04815 | Not Available | Negative | 1062583 - 1063515 | 32121.8 |
| threonine synthase | ESP50_04820 | Not Available | Negative | 1063512 - 1064588 | 37463.5 |
| homoserine dehydrogenase | ESP50_04825 | Not Available | Negative | 1064633 - 1065937 | 44919.7 |
| diaminopimelate decarboxylase | ESP50_04830 | Not Available | Negative | 1065934 - 1067340 | 49191.1 |
| duf2993 domain-containing protein | ESP50_04835 | Not Available | Negative | 1067502 - 1068227 | 24236.6 |
| arginine--trna ligase | ESP50_04840 | Not Available | Negative | 1068235 - 1069902 | 60001.5 |
| iron abc transporter atp-binding protein | ESP50_04845 | Not Available | Positive | 1069942 - 1070568 | 20961.0 |
| Trna-arg | Not Available | Not Available | Positive | 1070593 - 1070665 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
