Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit | ESP50_04755 | Not Available | Positive | 1045613 - 1048195 | 91304.7 |
| nitrite reductase small subunit nird | ESP50_04760 | Not Available | Positive | 1048192 - 1048569 | 13577.2 |
| uroporphyrinogen-iii c-methyltransferase | ESP50_04765 | Not Available | Positive | 1048566 - 1049798 | 42045.1 |
| uroporphyrinogen-iii synthase | ESP50_04770 | Not Available | Positive | 1049795 - 1050934 | 39273.0 |
| sirohydrochlorin chelatase | ESP50_04775 | Not Available | Positive | 1050931 - 1051650 | 24616.4 |
| cobalamin biosynthesis protein cbix | ESP50_04780 | Not Available | Negative | 1051590 - 1052351 | 26063.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | ESP50_04785 | Not Available | Negative | 1052493 - 1053173 | 24860.6 |
| mfs transporter | ESP50_04790 | Not Available | Positive | 1053380 - 1054792 | 49773.9 |
| nad(p)/fad-dependent oxidoreductase | ESP50_04795 | Not Available | Positive | 1054797 - 1056419 | 56071.6 |
| nitrite reductase | ESP50_04800 | Not Available | Positive | 1056416 - 1058536 | 75358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
