Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ESP50_00390 | Not Available | Negative | 98248 - 104103 | 201332.0 |
| metal abc transporter substrate-binding protein | ESP50_00395 | Not Available | Positive | 104430 - 105344 | 32375.7 |
| metal abc transporter atp-binding protein | ESP50_00400 | Not Available | Positive | 105341 - 106072 | 26230.6 |
| metal abc transporter permease | ESP50_00405 | Not Available | Positive | 106069 - 106938 | 30209.3 |
| rhamnogalacturonan lyase | ESP50_00410 | Not Available | Negative | 107053 - 109584 | 91260.4 |
| metal-dependent transcriptional regulator | ESP50_00415 | Not Available | Positive | 109803 - 110456 | 23390.8 |
| luxr family transcriptional regulator | ESP50_00420 | Not Available | Negative | 110507 - 112384 | 66875.0 |
| had family hydrolase | ESP50_00425 | Not Available | Positive | 112577 - 113374 | 28558.1 |
| hypothetical protein | ESP50_00430 | Not Available | Positive | 113445 - 113627 | 6068.33 |
| duf4190 domain-containing protein | ESP50_00435 | Not Available | Negative | 113645 - 114154 | 16751.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
