Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase domain-containing protein | ESP50_11895 | Not Available | Positive | 2559325 - 2560659 | 46533.9 |
| polysaccharide pyruvyl transferase family protein | ESP50_11900 | Not Available | Positive | 2560616 - 2561464 | 30747.7 |
| glycosyltransferase family 2 protein | ESP50_11905 | Not Available | Positive | 2561461 - 2562513 | 38248.6 |
| hypothetical protein | ESP50_11910 | Not Available | Negative | 2562517 - 2564256 | 62567.2 |
| duf4012 domain-containing protein | ESP50_11915 | Not Available | Positive | 2564328 - 2566220 | 66459.2 |
| hypothetical protein | ESP50_11920 | Not Available | Positive | 2566283 - 2566771 | 15550.7 |
| udp-glucose/gdp-mannose dehydrogenase family protein | ESP50_11925 | Not Available | Negative | 2567017 - 2568312 | 45665.4 |
| vanz family protein | ESP50_11930 | Not Available | Negative | 2568420 - 2568785 | 12621.7 |
| cell wall protein | ESP50_11935 | Not Available | Positive | 2569078 - 2569677 | 20210.7 |
| duf4012 domain-containing protein | ESP50_11940 | Not Available | Positive | 2569680 - 2571449 | 60086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
