Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | ESP50_11795 | Not Available | Positive | 2536173 - 2537060 | 32104.2 |
| coenzyme f420 hydrogenase | ESP50_11800 | Not Available | Positive | 2537057 - 2538307 | 45087.8 |
| lipopolysaccharide biosynthesis protein | ESP50_11805 | Not Available | Positive | 2538300 - 2539769 | 52210.9 |
| o-antigen ligase domain-containing protein | ESP50_11810 | Not Available | Positive | 2539766 - 2541178 | 49409.1 |
| glycosyltransferase | ESP50_11815 | Not Available | Positive | 2541165 - 2542205 | 37159.1 |
| glycosyltransferase family 2 protein | ESP50_11820 | Not Available | Positive | 2542202 - 2543221 | 37577.1 |
| glycosyltransferase | ESP50_11825 | Not Available | Positive | 2543221 - 2544318 | 38939.9 |
| hypothetical protein | ESP50_11830 | Not Available | Positive | 2544351 - 2545310 | 35962.2 |
| hypothetical protein | ESP50_11835 | Not Available | Positive | 2545518 - 2546510 | 36765.6 |
| glycosyltransferase | ESP50_11840 | Not Available | Negative | 2546618 - 2547265 | 24137.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
