Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | ESP50_11085 | Not Available | Positive | 2395701 - 2397020 | 44975.1 |
| transcriptional repressor nrdr | ESP50_11090 | Not Available | Positive | 2397028 - 2397501 | 17475.7 |
| quinone-dependent dihydroorotate dehydrogenase | ESP50_11095 | Not Available | Positive | 2397507 - 2398535 | 36351.1 |
| duf2183 domain-containing protein | ESP50_11100 | Not Available | Negative | 2398708 - 2399766 | 38869.4 |
| tetr/acrr family transcriptional regulator | ESP50_11105 | Not Available | Positive | 2399644 - 2400528 | 32115.6 |
| deda family protein | ESP50_11110 | Not Available | Negative | 2400536 - 2401195 | 24046.7 |
| m56 family peptidase | ESP50_11115 | Not Available | Negative | 2401213 - 2402139 | 32678.2 |
| transcriptional regulator | ESP50_11120 | Not Available | Negative | 2402154 - 2402507 | 12985.5 |
| cytochrome ubiquinol oxidase subunit i | ESP50_11125 | Not Available | Positive | 2402620 - 2404032 | 52171.1 |
| cytochrome d ubiquinol oxidase subunit ii | ESP50_11130 | Not Available | Positive | 2404042 - 2405049 | 36876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
