Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | ESP50_10735 | Not Available | Positive | 2324014 - 2326671 | 94813.3 |
| holliday junction resolvase ruvx | ESP50_10740 | Not Available | Positive | 2326671 - 2327141 | 16352.6 |
| endolytic transglycosylase mltg | ESP50_10745 | Not Available | Positive | 2327220 - 2328494 | 44789.1 |
| shikimate dehydrogenase | ESP50_10750 | Not Available | Positive | 2328487 - 2329323 | 29455.1 |
| chorismate synthase | ESP50_10755 | Not Available | Positive | 2329376 - 2330581 | 41700.9 |
| shikimate kinase | ESP50_10760 | Not Available | Positive | 2330592 - 2331089 | 18016.7 |
| 3-dehydroquinate synthase | ESP50_10765 | Not Available | Positive | 2331086 - 2332159 | 38380.0 |
| type ii 3-dehydroquinate dehydratase | ESP50_10770 | Not Available | Positive | 2332183 - 2332626 | 15577.4 |
| elongation factor p | ESP50_10775 | Not Available | Positive | 2332679 - 2333242 | 20312.8 |
| transcription antitermination factor nusb | ESP50_10780 | Not Available | Positive | 2333242 - 2333655 | 15024.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
