Agromyces atrinae str. DSM 23870

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces atrinae strain DSM 23870 is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and optimal growth at a temperature of 29.0°C. This microbe belongs to the genus Agromyces, which is known for its diverse ecological roles and ability to thrive in various environments. The Gram-positive nature of A. atrinae indicates the presence of a thick peptidoglycan layer in its cell wall, a feature that may confer advantages in specific environmental conditions, including resistance to certain external stressors. The rod shape of this organism is typical among many members of the Actinobacteria phylum, suggesting a potential for filamentous growth under certain circumstances, although such growth has not been specifically documented for this strain. As an aerobic organism, A. atrinae relies on oxygen for its metabolic processes, which may influence its ecological niche, likely favoring environments where oxygen is readily available. The optimal growth temperature of 29.0°C suggests a preference for moderate temperatures, potentially aligning with habitats such as soil or decomposing organic matter, where microbial activity is prevalent. Overall, Agromyces atrinae str. DSM 23870 exemplifies the functional diversity within the Agromyces genus, and its traits may contribute to its role in nutrient cycling, particularly in warm, oxygen-rich environments. Further studies could elucidate its specific ecological functions and interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces atrinae
StrainDSM 23870

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces atrinae strain DSM 23870 Scaffold23, whole genome

Gene Summary

Adenine Count

593037 bp

Thymine Count

598634 bp

Guanine Count

1335443 bp

Cytosine Count

1329680 bp

Genome Length

3858615 bp

Protein-coding Genes

3458 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosyl-amp cyclohydrolaseESP50_09360Not AvailableNegative2052257 - 205261913664.0
imidazole glycerol phosphate synthase subunit hisfESP50_09365Not AvailableNegative2052619 - 205338026222.2
atp phosphoribosyltransferaseESP50_09370Not AvailableNegative2053391 - 205423029576.5
phosphoribosyl-atp diphosphataseESP50_09375Not AvailableNegative2054295 - 20545589605.36
ribulose-phosphate 3-epimeraseESP50_09380Not AvailableNegative2054571 - 205523323755.4
rrna small subunit methyltransferase bESP50_09385Not AvailableNegative2055263 - 205661548469.8
methionyl-trna formyltransferaseESP50_09390Not AvailableNegative2056652 - 205757531772.9
primosomal protein n'ESP50_09395Not AvailableNegative2057575 - 205956370053.2
methionine adenosyltransferaseESP50_09400Not AvailableNegative2059565 - 206075843049.9
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcESP50_09405Not AvailableNegative2060815 - 206200841553.9

Displaying genes 1851 – 1860 of 3511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.