Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | ESP50_00585 | Not Available | Negative | 144241 - 144579 | 12386.6 |
| 3-hydroxyacyl-coa dehydrogenase | ESP50_00590 | Not Available | Negative | 144576 - 145556 | 34672.5 |
| iron-containing alcohol dehydrogenase | ESP50_00595 | Not Available | Negative | 145553 - 146827 | 44563.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | ESP50_00600 | Not Available | Negative | 146824 - 148320 | 52156.1 |
| gntr family transcriptional regulator | ESP50_00605 | Not Available | Positive | 148439 - 149128 | 25418.6 |
| fis family transcriptional regulator | ESP50_00610 | Not Available | Positive | 149279 - 151000 | 61181.6 |
| abc transporter permease | ESP50_00615 | Not Available | Negative | 150982 - 152037 | 35826.7 |
| atp-binding cassette domain-containing protein | ESP50_00620 | Not Available | Negative | 152034 - 154526 | 86793.8 |
| glucose 1-dehydrogenase | ESP50_00625 | Not Available | Negative | 154630 - 155349 | 25253.8 |
| ribose abc transporter substrate-binding protein | ESP50_00630 | Not Available | Negative | 155423 - 156598 | 40801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
