Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ESP50_06415 | Not Available | Negative | 1397516 - 1398187 | 23302.7 |
| type iv pilus assembly protein pilm | ESP50_06420 | Not Available | Negative | 1398184 - 1399233 | 35445.5 |
| prepilin peptidase | ESP50_06425 | Not Available | Negative | 1399260 - 1400096 | 28470.8 |
| hypothetical protein | ESP50_06430 | Not Available | Negative | 1400093 - 1401571 | 50402.0 |
| hypothetical protein | ESP50_06435 | Not Available | Negative | 1401562 - 1402242 | 22829.1 |
| hypothetical protein | ESP50_06440 | Not Available | Negative | 1402242 - 1402652 | 14016.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | ESP50_06445 | Not Available | Negative | 1402745 - 1403176 | 14663.5 |
| type ii secretion system f family protein | ESP50_06450 | Not Available | Negative | 1403311 - 1404531 | 43173.0 |
| type iv pilus twitching motility protein pilt | ESP50_06455 | Not Available | Negative | 1404531 - 1405691 | 41655.9 |
| type ii secretion system protein gspe | ESP50_06460 | Not Available | Negative | 1405747 - 1407402 | 59711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
