Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | DSM 23870 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | ESP50_05710 | Not Available | Negative | 1259994 - 1260623 | 22536.3 |
| hypothetical protein | ESP50_05715 | Not Available | Positive | 1260738 - 1261007 | 9976.97 |
| Trna-lys | Not Available | Not Available | Positive | 1261023 - 1261096 | Not Available |
| duf4433 domain-containing protein | ESP50_05725 | Not Available | Negative | 1261147 - 1261944 | 28297.2 |
| duf445 domain-containing protein | ESP50_05730 | Not Available | Negative | 1262008 - 1263222 | 44235.0 |
| anti-sigma factor | ESP50_05735 | Not Available | Negative | 1263282 - 1264091 | 27392.5 |
| sigma-70 family rna polymerase sigma factor | ESP50_05740 | Not Available | Negative | 1264088 - 1264678 | 21853.3 |
| fasciclin domain-containing protein | ESP50_05745 | Not Available | Positive | 1265059 - 1265715 | 21951.8 |
| aldose epimerase | ESP50_05750 | Not Available | Negative | 1265854 - 1266780 | 33199.8 |
| nadph:quinone reductase | ESP50_05755 | Not Available | Positive | 1266862 - 1267887 | 34806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
