Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b plasmid pPAT9B05, complete sequence.

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein tracPAT9B_RS29140Not AvailablePositive65725 - 6837098934.0
trbi f-type domain-containing proteinPAT9B_RS30195Not AvailablePositive68386 - 6884115809.8
type-f conjugative transfer system protein trawPAT9B_RS29150Not AvailablePositive68838 - 6945823403.2
hypothetical proteinPAT9B_RS29155Not AvailablePositive69455 - 6974510420.5
hypothetical proteinPAT9B_RS29160Not AvailablePositive69877 - 7015210427.1
hypothetical proteinPAT9B_RS29165Not AvailablePositive70307 - 7064812815.7
conjugal transfer pilus assembly protein trauPAT9B_RS29170Not AvailablePositive70645 - 7163736255.9
type-f conjugative transfer system pilin assembly protein trbcPAT9B_RS29175Not AvailablePositive71647 - 7227022313.1
type-f conjugative transfer system mating-pair stabilization protein tranPAT9B_RS29180Not AvailablePositive72267 - 7410564344.3
type-f conjugative transfer system pilin assembly protein trafPAT9B_RS29185Not AvailablePositive74105 - 7490229632.0

Displaying genes 71 – 80 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.