Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b plasmid pPAT9B05, complete sequence.

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeasePAT9B_RS24880Not AvailablePositive204816 - 20547223696.9
amino acid abc transporter atp-binding proteinPAT9B_RS24885Not AvailablePositive205453 - 20618126060.9
transporter substrate-binding domain-containing proteinPAT9B_RS24890Not AvailablePositive206200 - 20698528099.8
succinylglutamate desuccinylase/aspartoacylase family proteinPAT9B_RS24895Not AvailablePositive206988 - 20798035002.6
threonine/serine dehydratasePAT9B_RS24900Not AvailablePositive207980 - 20892133509.3
helix-turn-helix domain-containing proteinPAT9B_RS24905Not AvailablePositive209094 - 20940811775.6
type ii toxin-antitoxin system hipa family toxinPAT9B_RS24910Not AvailablePositive209405 - 21066746308.5
gnat family n-acetyltransferasePAT9B_RS24915Not AvailablePositive210667 - 21120620519.3
sdr family nad(p)-dependent oxidoreductasePAT9B_RS24920Not AvailableNegative211207 - 21184523028.6
transposasePAT9B_RS24925Not AvailablePositive212107 - 21323741019.2

Displaying genes 321 – 330 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.