Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis thailandensis |
| Strain | JCM 16380 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459846 bp
Thymine Count
1460422 bp
Guanine Count
3221154 bp
Cytosine Count
3206841 bp
Genome Length
9348263 bp
Protein-coding Genes
8331 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esx-1 secretion-associated protein | CFP71_41165 | Not Available | Positive | 9012107 - 9012430 | 10834.8 |
| rhs protein | CFP71_41170 | Not Available | Positive | 9012427 - 9013447 | 36038.9 |
| recombinase | CFP71_41175 | Not Available | Negative | 9013448 - 9013688 | 8540.16 |
| aspartate aminotransferase family protein | CFP71_41180 | Not Available | Negative | 9013760 - 9015124 | 48558.3 |
| prepilin peptidase | CFP71_41185 | Not Available | Positive | 9015435 - 9015821 | 11907.7 |
| chorismate synthase | CFP71_41190 | Not Available | Positive | 9015869 - 9017056 | 41653.8 |
| shikimate kinase | CFP71_41195 | Not Available | Positive | 9017050 - 9017577 | 18195.0 |
| hypothetical protein | CFP71_41200 | Not Available | Positive | 9017574 - 9017996 | 14228.0 |
| 3-dehydroquinate synthase | CFP71_41205 | Not Available | Positive | 9018005 - 9019114 | 38878.1 |
| type ii 3-dehydroquinate dehydratase | CFP71_41210 | Not Available | Positive | 9019111 - 9019542 | 15265.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.