Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis thailandensis |
| Strain | JCM 16380 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459846 bp
Thymine Count
1460422 bp
Guanine Count
3221154 bp
Cytosine Count
3206841 bp
Genome Length
9348263 bp
Protein-coding Genes
8331 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | CFP71_28285 | Not Available | Positive | 6225195 - 6225938 | 26462.8 |
| hypothetical protein | CFP71_28290 | Not Available | Positive | 6225935 - 6226495 | 18743.3 |
| hypothetical protein | CFP71_28295 | Not Available | Positive | 6226628 - 6227170 | 19438.0 |
| hit family protein | CFP71_28300 | Not Available | Positive | 6227357 - 6227668 | 11462.7 |
| hypothetical protein | CFP71_28305 | Not Available | Negative | 6228219 - 6228431 | 7618.24 |
| crispr-associated endonuclease cas2 | CFP71_28310 | Not Available | Negative | 6228832 - 6229122 | 10669.9 |
| crispr-associated endonuclease cas1 | CFP71_28315 | Not Available | Negative | 6229124 - 6230104 | 36148.6 |
| type i-c crispr-associated protein cas7/csd2 | CFP71_28320 | Not Available | Negative | 6230110 - 6231000 | 32567.3 |
| type i-c crispr-associated protein cas8c/csd1 | CFP71_28325 | Not Available | Negative | 6231050 - 6232831 | 65211.6 |
| type i-c crispr-associated protein cas5 | CFP71_28330 | Not Available | Negative | 6232832 - 6233494 | 24448.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.