Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis thailandensis |
| Strain | JCM 16380 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459846 bp
Thymine Count
1460422 bp
Guanine Count
3221154 bp
Cytosine Count
3206841 bp
Genome Length
9348263 bp
Protein-coding Genes
8331 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease | CFP71_06360 | Not Available | Positive | 1416701 - 1417390 | 24113.2 |
| sige family rna polymerase sigma factor | CFP71_06365 | Not Available | Positive | 1417458 - 1417973 | 19303.1 |
| hypothetical protein | CFP71_06370 | Not Available | Positive | 1417973 - 1418761 | 26805.0 |
| hypothetical protein | CFP71_06375 | Not Available | Positive | 1418889 - 1419614 | 26464.5 |
| metal-binding protein | CFP71_06380 | Not Available | Positive | 1419750 - 1420367 | 21988.5 |
| 50s ribosomal protein l32 | CFP71_06385 | Not Available | Positive | 1420440 - 1420622 | 6678.21 |
| ribonuclease iii | CFP71_06390 | Not Available | Positive | 1420683 - 1421384 | 24856.6 |
| dna-formamidopyrimidine glycosylase | CFP71_06400 | Not Available | Positive | 1422972 - 1423823 | 31272.4 |
| helicase | CFP71_06405 | Not Available | Negative | 1424571 - 1425761 | 44483.8 |
| atp-dependent helicase | CFP71_06410 | Not Available | Negative | 1425758 - 1427743 | 73377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.