Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and the ability to form chains or exist as singles. This strain optimally thrives at a temperature of 37.0°C, which coincides with the body temperature of many warm-blooded hosts, suggesting its adaptation to a host-associated habitat. As a chemoorganotroph, S. Typhimurium str. 14028S utilizes organic compounds as its energy source, which is typical for microbes that inhabit environments rich in organic material, such as the gastrointestinal tracts of animals. The microaerophilic nature of this strain indicates that it requires reduced levels of oxygen for growth, which may influence its metabolic processes and interactions within the host environment. The ability to form chains may also play a role in its survival and colonization strategies, potentially facilitating cooperation among cells or enhancing resistance to host defenses. Understanding the traits of S. enterica subsp. enterica serovar Typhimurium str. 14028S not only provides insights into its physiological characteristics but also highlights its ecological niche within host organisms, where it may engage in complex interactions with the host microbiota and immune system. Such dynamics could be critical for its survival and proliferation within the host ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Typhimurium 14028S

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Typhimurium str.

Gene Summary

Adenine Count

1164823 bp

Thymine Count

1163340 bp

Guanine Count

1271100 bp

Cytosine Count

1271002 bp

Genome Length

4870265 bp

Protein-coding Genes

4313 genes

Non-Coding Genes

434 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pirin family proteinSTM14_RS17255Not AvailablePositive3419266 - 341996726043.0
hypothetical proteinSTM14_RS17260Not AvailablePositive3419991 - 34201555757.93
serine dehydratase subunit alpha family proteinSTM14_RS17265Not AvailableNegative3420268 - 342157845156.5
amino acid permeaseSTM14_RS17270Not AvailableNegative3421604 - 342293548431.8
l-serine ammonia-lyaseSTM14_RS17275Not AvailableNegative3423251 - 342461548495.5
formate c-acetyltransferaseSTM14_RS17280Not AvailableNegative3424685 - 342697985869.3
propionate kinaseSTM14_RS17285Not AvailableNegative3427013 - 342822143720.5
threonine/serine transporter tdccSTM14_RS17290Not AvailableNegative3428287 - 342961848976.9
bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcbSTM14_RS17295Not AvailableNegative3429639 - 343062835143.5
transcriptional regulator tdcaSTM14_RS17300Not AvailableNegative3430726 - 343166434872.3

Displaying genes 3401 – 3410 of 4867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da
BASm0003997Fe(II)-heme oC49H56FeN4O5Chemical structure of Fe(II)-heme oNot available
Average836.856Da
Monoisotopic836.361104Da
BASm0004172(R)-4'-phosphopantetheineC11H21N2O7PSChemical structure of (R)-4'-phosphopantetheineNot available
Average356.33Da
Monoisotopic356.081806356Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da

Displaying 1–10 of 14 metabolites

Health Effects

No health effects information available for this bacterium.